CDS

Accession Number TCMCG066C05017
gbkey CDS
Protein Id XP_034581394.1
Location complement(join(4004232..4004495,4004774..4004815,4004903..4004956,4005116..4005179,4005336..4005430,4005500..4005607,4005700..4005773,4006366..4006438,4006542..4006589,4006695..4006878,4007270..4007448,4007704..4007796,4008178..4008291,4009067..4009141,4009400..4009660,4010203..4010316,4010437..4010493,4011413..4011569,4011678..4011742,4012436..4012519,4012599..4012641,4012739..4012845,4013136..4013204,4013546..4013812))
Gene LOC117844731
GeneID 117844731
Organism Setaria viridis

Protein

Length 896aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034725503.1
Definition probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category J
Description 3' exoribonuclease family, domain 1
KEGG_TC -
KEGG_Module M00394        [VIEW IN KEGG]
KEGG_Reaction R00437        [VIEW IN KEGG]
R00438        [VIEW IN KEGG]
R00439        [VIEW IN KEGG]
R00440        [VIEW IN KEGG]
KEGG_rclass RC02795        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K00962        [VIEW IN KEGG]
EC 2.7.7.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00230        [VIEW IN KEGG]
ko00240        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
map00230        [VIEW IN KEGG]
map00240        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0000175        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004527        [VIEW IN EMBL-EBI]
GO:0004532        [VIEW IN EMBL-EBI]
GO:0004540        [VIEW IN EMBL-EBI]
GO:0004654        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006109        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006778        [VIEW IN EMBL-EBI]
GO:0006779        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008408        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009267        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0009991        [VIEW IN EMBL-EBI]
GO:0010322        [VIEW IN EMBL-EBI]
GO:0010323        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010565        [VIEW IN EMBL-EBI]
GO:0010675        [VIEW IN EMBL-EBI]
GO:0010677        [VIEW IN EMBL-EBI]
GO:0015994        [VIEW IN EMBL-EBI]
GO:0015995        [VIEW IN EMBL-EBI]
GO:0016036        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016119        [VIEW IN EMBL-EBI]
GO:0016120        [VIEW IN EMBL-EBI]
GO:0016122        [VIEW IN EMBL-EBI]
GO:0016123        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016779        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016796        [VIEW IN EMBL-EBI]
GO:0016896        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019216        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019747        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031425        [VIEW IN EMBL-EBI]
GO:0031667        [VIEW IN EMBL-EBI]
GO:0031668        [VIEW IN EMBL-EBI]
GO:0031669        [VIEW IN EMBL-EBI]
GO:0033013        [VIEW IN EMBL-EBI]
GO:0033014        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0042214        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0042594        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045827        [VIEW IN EMBL-EBI]
GO:0045833        [VIEW IN EMBL-EBI]
GO:0045912        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0046246        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0046890        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051055        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051186        [VIEW IN EMBL-EBI]
GO:0051188        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0062012        [VIEW IN EMBL-EBI]
GO:0062014        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071071        [VIEW IN EMBL-EBI]
GO:0071072        [VIEW IN EMBL-EBI]
GO:0071496        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090503        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903725        [VIEW IN EMBL-EBI]
GO:1903726        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCTCGCGGGCCCCGCCGCGCTCCACCTCCTCCTCCCGGCGCCTCCGCCGCACCGCCGCCACCTCGCGTTCGCGCTCCCGCAGCAGCACCCCGAGCCGCCGCTCCACGCCTCGCTCCCGCGCGCCGCGTGCTCGCGCCGCCGCGCGCGGAGGAGGGCGCCAGCGCAGAGGCATGTCGTTGTCAGGGCATCCGCCGCGGTCGCGGAGGAGGAGAGCAGCTCCGGACCGTCCAAGTTCTCCGTCAGGATCCCGGTCGGCGACCGCGAGATACTGGTGGAGACGGGCCACATTGGGAGGCAAGCGAGTGCTTCTGTAATGGTCACGGACGGGGAAACAATTCTCTACTGTTCTGTTTGTCTGTCCGATTCTCCAAACGACCCTTCTGACTTTTTCCCTTTATCGGTTCACTATCAAGAGCGCCTTTCAGCTGCTGGAAGAACTAGTGGTGGTTTCTTCAAACGAGAAGGCAAGGCAAAAGACCATGAGGTTTTAGTATGCAGATTGATAGACAGGCCCCTACGACCTACTATGCCCAAGGGTTTCTACTATGAAACTCAAGTTCTATCCTGGGTCTTCAGTTATGATGGCATTCACTCTCCGGATTGCTTGGCTATCACAGCTGCTGGTATAGCCGTGGCTCTCTCTGAAATTCCAAATAAACAAACAATTGCTGGGGTAAGAGTTGGCCTGATTAACGGCCAGTTTGTTATTAACCCAACTACTGAACAAATGGAGAATTCAGAGTTGGATTTGATGATGGCTGGGACTGATAGTGCCATATTGATGATTGAGGGCTACTGTGATTTCCTGACTGAGGAGAAGCTGCTAGAAGCTGTGGAAGCTGGGCAGGTGGCAATTCGAGAGATCTGCAAAGCAATTGATGTTCTTGTCCAGAACTGTGGAAAGAAGAAGATGGTTGATGCTATTGCCTTACCACCTCCTGAACTCTACAGGCATGTTGAAGATATTTCTGGTGATGAGTTGGTGAAGGCATTGCAAATAAAAGAAAAGATTCCCAGAAGGAAAGCTCTTTCAGCAGTGGAGGAGAAAGTTATAACTATACTTTCTGAACAGGGTTATGTTTGCAAAGATATCTCATCAGGAGTTGCTGAAAGTTTGGATGATATTGTAGAGGACGAAGATGAGGATGAAGTTATAGTGGATGGAGAAGTAGATGAAGGTGATGTTCACATCAAGCCGGTTTCAAGGAAGCCCCCTCGTCAGCTATTTGCAGAAGTTGATGTCAAGCTAGTCTTCAAGGAGGTTTCATCTAAATATTTACGACGACGCATTGTAGAGGGCGGAAAGCGAAGCGATGGACGGAGTCCTTGGGAACTTCGACCCATTAATTCTCAATGTGGGTTACTTCCACGAGCACATGGTAGTGCTCTGTTCACGAGGGGAGAAACACAGTCACTGGCTGTGGTCACTTTAGGTGGTTATCAAATGGCACAACGAATTGACAACCTTGTAGACACCGAGGAATCAAAAAGCTTCTATCTTCAGTACTCATTTCCTCCATCATGTGTTGGTGAAGTTGGTCGAATTGGAGCACCTAGTAGGAGAGAGATTGGACACGGTATGCTTGCAGAAAGGGCACTGGAGCCAATTTTACCTCTGGAAGAGGATTTTCCTTACACTATTCGTGTCGAGAGTACTATCACTGAAAGTAATGGCTCATCCAGCATGGCTTCTGTTTGTGGAGGTTGTTTAGCACTTCAAGATGCTGGGGTTCCTATAAAGTTTCCTGTTGCTGGAATAGCAATGGGCTTGGTTCTTGATACACAAGAATTTGGTGGCGATGGTAGCCCACTTATACTTTCTGATATTACTGGAGCTGAAGATGCCTCTGGTGATATGGATTTGAAGGTTGCTGGTAATGAAAGTGGTATAACTGCTTTCCAGATGGACATCAAGGTAGTTGGGATAACTCTACCTGTGATGGAACAAGCACTCCTTCAGGCTAGGGATGGTAGACGGCATATTCTGAATGAAATGTCAAAATCTTCACCTCCACCATCAAAAGCACTATCTCCGCATGCTCCCTTAATTCACGTCATGAAGGTCAAACCTAACAAGGTGAATTTAATAATTGGTTCTGGTGGAAAGACAATAAAAAGTATAATTGAGGAGACTGGGGTAGATGCTATTGATACTGGAGATGATGGCACGGTAAAAATTACCGCAAGGGACTTATCAAGCTTAGAGAAGTCAAAAACTATAATAGCTAACCTTACCATGGTTCCAAAAGTTGGGGAAATTTACAGGAATTGTGAGATCAAATCAATAGCTCCATACGGTGCCTTTGTTGAAATTGCTCCAGGACGTGAGGGTCTATGTCATATCAGTGAGTTAAGTTCGGGCTGGTTGGCCAAGGCTGAGGATGCTTTCAAAGTAGGTGATCGCATAGACGTCAAGCTTATTGAGATAAATGACAAGGGCCAACTACGACTAAGTTCTCGAGCTTTGCTTCCTAATGCGGATTCAGAATCCAACAGCAAGCAGCAAACAAGCAGCTCAACAAAAGAAAAGGTGCCGCAAAAAGATGATCTTATCAAGATGACAACAAGGAGAGCCAGGCGTAAGAAACAGTCTGAGCCGTCAGGAGCTGAAAATGCCACAACGAAGACTCTTGAAAAGAGTGCCGCTGCTTCAGCTACTTCACAAGGCAGTGAAACCGCAAAGAAGTAG
Protein:  
MLAGPAALHLLLPAPPPHRRHLAFALPQQHPEPPLHASLPRAACSRRRARRRAPAQRHVVVRASAAVAEEESSSGPSKFSVRIPVGDREILVETGHIGRQASASVMVTDGETILYCSVCLSDSPNDPSDFFPLSVHYQERLSAAGRTSGGFFKREGKAKDHEVLVCRLIDRPLRPTMPKGFYYETQVLSWVFSYDGIHSPDCLAITAAGIAVALSEIPNKQTIAGVRVGLINGQFVINPTTEQMENSELDLMMAGTDSAILMIEGYCDFLTEEKLLEAVEAGQVAIREICKAIDVLVQNCGKKKMVDAIALPPPELYRHVEDISGDELVKALQIKEKIPRRKALSAVEEKVITILSEQGYVCKDISSGVAESLDDIVEDEDEDEVIVDGEVDEGDVHIKPVSRKPPRQLFAEVDVKLVFKEVSSKYLRRRIVEGGKRSDGRSPWELRPINSQCGLLPRAHGSALFTRGETQSLAVVTLGGYQMAQRIDNLVDTEESKSFYLQYSFPPSCVGEVGRIGAPSRREIGHGMLAERALEPILPLEEDFPYTIRVESTITESNGSSSMASVCGGCLALQDAGVPIKFPVAGIAMGLVLDTQEFGGDGSPLILSDITGAEDASGDMDLKVAGNESGITAFQMDIKVVGITLPVMEQALLQARDGRRHILNEMSKSSPPPSKALSPHAPLIHVMKVKPNKVNLIIGSGGKTIKSIIEETGVDAIDTGDDGTVKITARDLSSLEKSKTIIANLTMVPKVGEIYRNCEIKSIAPYGAFVEIAPGREGLCHISELSSGWLAKAEDAFKVGDRIDVKLIEINDKGQLRLSSRALLPNADSESNSKQQTSSSTKEKVPQKDDLIKMTTRRARRKKQSEPSGAENATTKTLEKSAAASATSQGSETAKK